BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A01SP1|AL426761
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig944 1446 0.0
>3x_Contig944
Length = 2546
Score = 1446 bits (687), Expect = 0.0
Identities = 822/919 (89%), Gaps = 2/919 (0%)
Strand = Plus / Plus
Query: 2 ccaaatcgaacgatccagtggcacttgccacgaaaacgcctttkacaggtaacgcatagc 61
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 636 ccaaatcgaacgatccagtggcacttgccacgaaaacgccttttacaggtaacgcatagc 695
Query: 62 atctagccatttggtacgaaagcycatggaaatyagcaccacacaccycgacataacgtg 121
||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct: 696 atctagccatttggtacgaaagctcatggaaattagcaccacacacctcgacataacgtg 755
Query: 122 aaggagtaataatatgcaggccaccaacagtscatcygaaggaaatatcyttggaacccc 181
|||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||
Sbjct: 756 aaggagtaataatatgcaggtcaccaacagtgcatctgaaggaaatatctttggaacccc 815
Query: 182 tttgaaccacaatgattaycycaycyccyacmctgccayccagaatgtcaycmacytgaa 241
|||||||||||||||||| | || | || || |||| | | ||||||| | | || ||||
Sbjct: 816 tttgaaccacaatgattatctcatctcctacactgctatctagaatgttatcaacttgaa 875
Query: 242 tmamtsamcatatyggtgtsccattaayagamatcmatgtgycacccycytgaacyttat 301
| | | | ||||| ||||| ||||||| ||| || ||||| ||||| | ||||| ||||
Sbjct: 876 taaatgaacatattggtgtgccattaatagaaattaatgtgtcaccctcttgaactttat 935
Query: 302 yatmagccggycccycycygagaatagccycagccaccagcmaaccagtcttacccggga 361
|| ||| || ||| | | |||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 936 tataagctggtccctctctgagaatagcctcagccaccagcaaaccagttttacccggga 995
Query: 362 mccycttacgagccyccyycycacgaycyycacytaayccaagtcyycyacatycatcga 421
|| ||||||||| || | ||||| | ||| ||| ||||||| | |||| ||||||
Sbjct: 996 acctcttacgagcttccttctcacgatcttcacttaatccaagtcttctacattcatcga 1055
Query: 422 atggytycmatacccactgagtytggatagymccycyggygattggytyayccgtctgtm 481
|||| | | ||||||||||||| ||||||| || | || |||||| | | |||| |||
Sbjct: 1056 atggtttcaatacccactgagtttggatagtacctctggtgattggtttatccgtttgta 1115
Query: 482 cgcmttgtagagcycygacgacycgmycaasaggcaaaaagamatctgyagaagcctccg 541
||| ||||||||| | |||||| || ||| ||||||||||| ||||| |||||||||||
Sbjct: 1116 cgcattgtagagctctgacgactcgatcaagaggcaaaaagaaatctgtagaagcctccg 1175
Query: 542 aagagccaccggcctgtmaagcgaccgcmtacccctctacagtaataacyggagaaccag 601
||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 1176 aagagccaccggcctgtaaagcgaccgcatacccctctacagtaataactggagaaccag 1235
Query: 602 aagaaccacctgaygcagcagcagcascttgaatatattcagtatcaamatcattatacg 661
||||||||||||| |||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 1236 aagaaccacctgatgcagcagcagcagcttgaatatattcagtattaaaatcattatacg 1295
Query: 662 tcagctcaccatagtctggcgcatttctgtcaagtccactgatgaaccctgacaagatac 721
| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 1296 ttagctcaccatagtctggtgcatttctgtcaagtctactgatgaaccctgacaagatac 1355
Query: 722 tcaatttttcaccagcatcgttaccaacaacacggatttcagaaccaaccttggccaaag 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 tcaatttttcaccagcatcgttaccaacaacacggatttcagaaccaaccttggccaaag 1415
Query: 782 atggtttcaactctagtgcagtgacctcgatatatttcaacttcgatggatcaaacttca 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 atggtttcaactctagtgcagtgacctcgatatatttcaacttcgatggatcaaacttca 1475
Query: 842 agaacccaaaatcatgaactgggtcgcgatagatagggatgac-wcacactcttcgtgat 900
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1476 agaacccaaaatcatgaactgggtcgcgatagatagggatgacatcacactcttcgtgat 1535
Query: 901 tgtcg-aaatggcgtatcc 918
||||| |||||||||||||
Sbjct: 1536 tgtcgaaaatggcgtatcc 1554
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.46 0.724 1.38
Gapped
Lambda K H
1.46 0.724 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3177
Number of Sequences: 1807
Number of extensions: 3177
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 15
effective length of query: 912
effective length of database: 10,331,446
effective search space: 9422278752
effective search space used: 9422278752
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.5 bits)
S1: 11 (23.6 bits)
S2: 48 (101.5 bits)